Create compensation

Creates a new compensation.

createCompensation(experimentId, name, spillMatrix, channels = NULL)

Arguments

experimentId

The ID of the experiment of a byName expression.

name

Name of the compensation matrix.

spillMatrix

The spillover matrix. This can either be a 1-dimensional vector of size length(channels) ^ 2, or a matrix.

channels

The channel names. Not required if spillMatrix is a matrix with dimnames set.

Examples

if (FALSE) { # \dontrun{
createCompensation(
  experimentId,
  name="Comp 1",
  channels=c("Ax488-A", "PE-A"),
  spillMatrix=c(1, 0,
                0, 1)
)
# same as:
createCompensation(
  experimentId,
  name="Comp 1",
  spillMatrix=matrix(
    c(1, 0,
      0, 1),
    nrow=2,
    ncol=2,
    byrow=TRUE,
    dimnames=list(c("Ax488-A", "PE-A"), c("Ax488-A", "PE-A"))
  )
)
} # }